BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A04LP1|AL427553
(958 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig804 1856 0.0
>3x_Contig804
Length = 3085
Score = 1856 bits (935), Expect = 0.0
Identities = 954/959 (99%), Gaps = 2/959 (0%)
Strand = Plus / Plus
Query: 1 atggtacatgagcatttcttagatcccacgttaggacaagaggttctgtatctgagctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1937 atggtacatgagcatttcttagatcccacgttaggacaagaggttctgtatctgagctag 1996
Query: 61 aggcggttgcaataatggtagagctggttggatgccagtcaacaaccgtcaatgggacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1997 aggcggttgcaataatggtagagctggttggatgccagtcaacaaccgtcaatgggacct 2056
Query: 121 taataccagtggtagaggaactgtggttcaaatgcaaaacttgtttctttgccttt-aaa 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2057 taataccagtggtagaggaactgtggttcaaatgcaaaacttgtttctttgccttttaaa 2116
Query: 180 tcccacacagatgcataccctgaagaactggctgatgcaaacacatgtgccaacgattgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 tcccacacagatgcataccctgaagaactggctgatgcaaacacatgtgccaacgattgg 2176
Query: 240 ttccatgacaacgaggaaacttcatcgattggagtattactgataccagccgaaaaagga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2177 ttccatgacaacgaggaaacttcatcgattggagtattactgataccagccgaaaaagga 2236
Query: 300 gaataatctgaagatccgatcttgtttgaatcccaaacaaagatttcaccttgagtgcca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2237 gaataatctgaagatccgatcttgtttgaatcccaaacaaagatttcaccttgagtgcca 2296
Query: 360 ccagagacaagaacattgttctgtttggcattgaacttcaatgtcttgacaggaccctga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2297 ccagagacaagaacattgttctgtttggcattgaacttcaatgtcttgacaggaccctga 2356
Query: 420 tgtttatggatcttagcaacagatttcaaggcttttggatcgaaaaactcaacaacacca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2357 tgtttatggatcttagcaacagatttcaaggcttttggatcgaaaaactcaacaacacca 2416
Query: 480 ttttctaaggcaccagcaattattttgtcatcgcccgaccaatccaaatcgttgaactta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2417 ttttctaaggcaccagcaattattttgtcatcgcccgaccaatccaaatcgttgaactta 2476
Query: 540 ccgtcagcgacaacagatccactaggtttagacccatcaaaagacaatagcgaccatagt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2477 ccgtcagcgacaacagatccactaggtttagacccatcaaaagacaatagcgaccatagt 2536
Query: 600 tctaatgtcgaagtacttgawaaatcagcatcaatggctccagatgcaggaccagtcgcc 659
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2537 tctaatgtcgaagtacttgaaaaatcagcatcaatggctccagatgcaggaccagtcgcc 2596
Query: 660 aaaactggcaccctatcgtgagaccatgaaaacgtagccgtacgcggatactcagctagc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2597 aaaactggcaccctatcgtgagaccatgaaaacgtagccgtacgcggatactcagctagc 2656
Query: 720 ttcaccattgcttcaagttatcacacgggtattagctaatattgatgcgcaaactcaatg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2657 ttcaccattgcttcaagttatcacacgggtattagctaatattgatgcgcaaactcaatg 2716
Query: 780 ctacgtgtaacactgtttagccaccttttattcttctgaaaaagatcagaacaagctgtt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2717 ctacgtgtaacactgtttagccaccttttattcttctgaaaaagatcagaacaagctgtt 2776
Query: 840 gttttcctaaaattcggtttacatattttgaatcttcaatttctttggtttcttcagttc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2777 gttttcctaaaattcggtttacatattttgaatcttcaatttctttggtttcttcagttc 2836
Query: 900 ccatcatttataaaaacttcagcaaattattttttttgcagtcgagatctgggccmaaa 958
||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||
Sbjct: 2837 ccatcatttataaaaacttcagcaaatta-tttttttgcagtcgagatctggcccaaaa 2894
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7742
Number of Sequences: 1807
Number of extensions: 7742
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 958
length of database: 10,358,551
effective HSP length: 16
effective length of query: 942
effective length of database: 10,329,639
effective search space: 9730519938
effective search space used: 9730519938
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)